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  "Title": "A Combined Interaction Test for Unreplicated Two-Way Tables",
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  "Authors@R": "c(\nperson(\"Zahra\", \"Shenavari\", email = \"zshenavari@yahoo.com\", role = \"aut\"),\nperson(\"Hossein\", \"Haghbin\", email = \"haghbin@pgu.ac.ir\",role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-8416-2354\")),\nperson(\"Mahmood\", \"Kharrati-Kopaei\", email = \"mkharati@shirazu.ac.ir\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-5555-253X\")),\nperson(\"Seyed Morteza\", \"Najibi\", email = \"mor.najibi@gmail.com\", role = \"aut\")\n)",
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  "Description": "There are several non-functional-form-based interaction\ntests for testing interaction in unreplicated two-way layouts.\nHowever, no single test can detect all patterns of possible\ninteraction and the tests are sensitive to a particular pattern\nof interaction. This package combines six\nnon-functional-form-based interaction tests for testing\nadditivity. These six tests were proposed by Boik (1993)\n<doi:10.1080/02664769300000004>, Piepho (1994), Kharrati-Kopaei\nand Sadooghi-Alvandi (2007) <doi:10.1080/03610920701386851>,\nFranck et al. (2013) <doi:10.1016/j.csda.2013.05.002>, Malik et\nal. (2016) <doi:10.1080/03610918.2013.870196> and\nKharrati-Kopaei and Miller (2016)\n<doi:10.1080/00949655.2015.1057821>. The p-values of these six\ntests are combined by Bonferroni, Sidak, Jacobi polynomial\nexpansion, and the Gaussian copula methods to provide\nresearchers with a testing approach which leverages many\nexisting methods to detect disparate forms of non-additivity.\nThis package is based on the following published paper:\nShenavari and Kharrati-Kopaei (2018) \"A Method for Testing\nAdditivity in Unreplicated Two-Way Layouts Based on Combining\nMultiple Interaction Tests\". In addition, several sentences in\nhelp files or descriptions were copied from that paper.",
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